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 All Marine Fauna + Flora combo of the Mediterranean Sea

[   NATL-Ocean-Only-ALL   ]
[   Baltic Sea   ]
[   Mediterranean Sea   ]
[   NATL-West-Ocean-ALL   ]
[   US-NE-LME   ]
[   CA-Scotian   ]
[   CA-GSL   ]
[   CA-Newfoundland-shelf   ]
[   NATL-East-Ocean-ALL   ]
[   East-Greenland   ]
[   East-Greenland   ]
[   East-Greenland   ]
[   East-Greenland   ]
[   Celtic-Seas   ]
[   Celtic-Seas   ]
[   Iberian-Shelf   ]


The data files below are full-taxa compilations that contain all taxa groups.   If you only want data from a single taxa group
(e.g., only barcodes for copepods or pteropods), follow the taxa group links found under main map pages.

The "All Invertebrates" files contain data from all of the zooplankton (crustacean+non-crustacean) and benthic taxa groups and subgroups.
The "All Vertebrates" files contain data from all of the fish and marine mammal taxa groups and subgroups.
The "All Microbes + Protists" files contain data from all of the phytoplankton (microbes and protists) taxa groups and subgroups.
The "All Marine Fauna + Flora Combo" files contain all data from the All Invertebrates, All Vertebrates, All Microbes + Protists combined files.

The "World (All-World-Oceans)" geographic region includes data from all of the other ocean and seas sub-regions.

The "Mode-A" files contain species-only barcodes for species found in the current ocean, but those sequences may come from any other ocean.
The "Mode-B" files contain species-only barcodes sampled only in the current ocean for species found in the current ocean.
The "Mode-C" files contain genus and/or species sequences for species found in the current ocean, but those sequences may come from any other ocean.
The "Mode-D" files contain genus and/or species sequences sampled only in the current ocean for species found in the current ocean.

The entire MZGdb database is therefore available via the "All Plankton Combo (All-World-Oceans) Mode-A" data files.

MZGdb DATA FILES

Database-Version:   v2023-m04-01		 Mode-A

COI barcodes = 69321
12s barcodes = 3957
16s barcodes = 14417
18s barcodes = 8120
28s barcodes = 4159
Mode-B

COI barcodes = 3713
12s barcodes = 70
16s barcodes = 524
18s barcodes = 526
28s barcodes = 144
Mode-C

COI barcodes = 108818
12s barcodes = 5525
16s barcodes = 24110
18s barcodes = 15349
28s barcodes = 9113
Mode-D

COI barcodes = 4578
12s barcodes = 90
16s barcodes = 844
18s barcodes = 796
28s barcodes = 314
FASTA file MZGdb fasta (mode-A)
COI | 12S | 16S | 18S | 28S

True "barcode" (species-only) data
from ANY ocean (mode-A) 		MZGdb fasta (mode-B)
COI | 12S | 16S | 18S | 28S

True "barcode" (species-only) data
from specific ocean (mode-B) 		MZGdb fasta (mode-C)
COI | 12S | 16S | 18S | 28S

Genus-spp and species data
from ANY ocean (mode-C) 		MZGdb fasta (mode-D)
COI | 12S | 16S | 18S | 28S

Genus-spp and species data
from specific ocean (mode-D)
Mothur-formatted
Taxonomic Hierarchy file

(paired with FASTA file above)		 MZGdb Mothur (mode-A)
COI | 12S | 16S | 18S | 28S

True "barcode" (species-only) data
from ANY ocean (mode-A) 		MZGdb Mothur (mode-B)
COI | 12S | 16S | 18S | 28S

True "barcode" (species-only) data
from specific ocean (mode-B) 		MZGdb Mothur (mode-C)
COI | 12S | 16S | 18S | 28S

Genus-spp and species data
from ANY ocean (mode-C) 		MZGdb Mothur (mode-D)
COI | 12S | 16S | 18S | 28S

Genus-spp and species data
from specific ocean (mode-D)
MZGdb v3.0

"full format"

go to
Format Description		CSV

Excel-friendly full format
comma-separated-values		 MZGdb CSV (mode-A)
COI | 12S | 16S | 18S | 28S

True "barcode" (species-only) data
from ANY ocean (mode-A) 		MZGdb CSV (mode-B)
COI | 12S | 16S | 18S | 28S

True "barcode" (species-only) data
from specific ocean (mode-B) 		MZGdb CSV (mode-C)
COI | 12S | 16S | 18S | 28S

Genus-spp and species data
from ANY ocean (mode-C) 		MZGdb CSV (mode-D)
COI | 12S | 16S | 18S | 28S

Genus-spp and species data
from specific ocean (mode-D)
PSV

pipe-separated-values		 MZGdb PSV (mode-A)
COI | 12S | 16S | 18S | 28S

True "barcode" (species-only) data
from ANY ocean (mode-A) 		MZGdb PSV (mode-B)
COI | 12S | 16S | 18S | 28S

True "barcode" (species-only) data
from specific ocean (mode-B) 		MZGdb PSV (mode-C)
COI | 12S | 16S | 18S | 28S

Genus-spp and species data
from ANY ocean (mode-C) 		MZGdb PSV (mode-D)
COI | 12S | 16S | 18S | 28S

Genus-spp and species data
from specific ocean (mode-D)











Thu Apr 13 21:26:08 EDT 2023